I don't understand your question. Do you have a chart to post?
Basically some astrologers do not use the trans-Saturnian planets as house lords, some do not use the traditional rulerships for Scorpio, Aquarius, and Pisces. In a natal chart, I'd look at both.
Basically, aren't you looking at the houses with Scorpio (Pluto,) Pisces (Neptune,) or Aquarius (Uranus) on the cusps?
Where you find these signs on house cusps will in part depend upon what house system you use.